STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LuPra_01276Bacterial leucyl aminopeptidase. (1132 aa)    
Predicted Functional Partners:
LuPra_03581
Peptidase Do.
     0.907
LuPra_00826
Putative bile acid beta-glucosidase.
     
 0.659
LuPra_03294
Exosortase A.
  
  0.639
LuPra_06241
Exosortase C, VPDSG-CTERM-specific.
  
  0.614
LuPra_05997
FemAB-related protein, PEP-CTERM system-associated.
  
     0.525
LuPra_03305
Putative O-glycosylation ligase, exosortase A-associated.
 
     0.521
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
 0.516
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.503
pepA
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
 
 0.494
LuPra_06273
FemAB-related protein, PEP-CTERM system-associated.
 
 
   0.492
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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