STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LuPra_01754GDSL-like Lipase/Acylhydrolase. (237 aa)    
Predicted Functional Partners:
LuPra_00212
Trehalose utilization.
  
     0.717
LuPra_00372
Cytochrome c domain-containing protein.
  
     0.701
atsA_7
Arylsulfatase.
 
     0.696
LuPra_05694
Putative membrane-bound dehydrogenase domain protein.
  
     0.673
LuPra_01415
Uncharacterized protein.
  
     0.650
LuPra_02934
Uncharacterized protein.
  
     0.606
LuPra_05038
Neutral/alkaline non-lysosomal ceramidase.
  
     0.586
LuPra_05398
Neuraminidase (Sialidase).
  
     0.571
LuPra_01733
Trehalose utilization.
  
     0.562
LuPra_05037
Putative membrane-bound dehydrogenase domain protein.
  
     0.522
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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