STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stp_3Serine/threonine phosphatase stp. (562 aa)    
Predicted Functional Partners:
bfmBAB
2-oxoisovalerate dehydrogenase subunit beta.
  
 0.937
pknA_3
Serine/threonine-protein kinase PknA.
 
   0.933
ftsW_1
Cell division protein FtsW; Belongs to the SEDS family.
 
  
 0.864
rsmB
Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
  
 0.844
prkC_13
Serine/threonine-protein kinase PrkC.
 
   0.783
pknA_1
Serine/threonine-protein kinase PknA.
  
   0.782
pknB_2
Serine/threonine-protein kinase PknB.
  
   0.780
pknB_6
Serine/threonine-protein kinase PknB.
  
   0.780
pknH_1
Serine/threonine-protein kinase PknH.
 
   0.780
pknB_7
Serine/threonine-protein kinase PknB.
 
   0.779
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.