STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xsaXylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. (352 aa)    
Predicted Functional Partners:
LuPra_05440
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.966
xynB_3
Endo-1,4-beta-xylanase B.
   
 0.798
LuPra_05612
Xylan alpha-1,2-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
   
 0.781
abn-ts_1
Intracellular endo-alpha-(1->5)-L-arabinanase.
 
     0.733
LuPra_01786
Glyco_hyd_65N_2 domain-containing protein.
 
     0.729
yesR
Unsaturated rhamnogalacturonyl hydrolase YesR.
 
     0.716
LuPra_05213
Uncharacterized protein.
 
      0.710
abf2_2
Intracellular exo-alpha-L-arabinofuranosidase 2.
 
  
 0.693
LuPra_01066
Uncharacterized protein.
  
  
 0.689
LuPra_01336
Uncharacterized protein.
  
  
 0.674
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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