STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lip2_1Lipase 2. (312 aa)    
Predicted Functional Partners:
LuPra_02331
Putative acetyltransferase.
       0.773
LuPra_02028
Prolyl oligopeptidase family protein.
  
     0.733
lcfB_4
Long-chain-fatty-acid--CoA ligase.
  
 
 0.622
axeA1_2
Acetylxylan esterase.
  
     0.578
nqo2
NADH-quinone oxidoreductase subunit 2.
    
   0.572
uxuA_1
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
       0.521
nqo3_1
NADH-quinone oxidoreductase chain 3.
    
 
 0.467
nqo3_2
NADH-quinone oxidoreductase subunit 3.
    
 
 0.467
nuoF_1
NADH-quinone oxidoreductase subunit F.
    
   0.456
nuoF_2
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
    
   0.456
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.