STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
isp_2Major intracellular serine protease. (559 aa)    
Predicted Functional Partners:
LuPra_02420
Uncharacterized protein.
      0.739
aprX_1
Serine protease AprX.
  
     0.694
LuPra_05981
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase.
  
     0.584
LuPra_01927
Ankyrin repeat protein.
  
 0.500
LuPra_01173
Trypsin.
 
   
 0.481
LuPra_01086
DinB superfamily protein.
  
     0.443
isp_1
Major intracellular serine protease; Belongs to the peptidase S8 family.
  
     0.424
apr_2
Subtilisin DY; Belongs to the peptidase S8 family.
  
     0.424
LuPra_01997
Uncharacterized protein.
  
     0.404
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.