STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
norBNitric oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family. (454 aa)    
Predicted Functional Partners:
nosZ
Nitrous-oxide reductase.
  
 
 0.995
norC
Nitric oxide reductase cytochrome c subunit.
 
 
  0.994
LuPra_02425
Nitric oxide reductase activation protein.
 
  
 0.990
nirQ
Denitrification regulatory protein NirQ.
 
  
 0.958
LuPra_02011
Nitrous oxide reductase family maturation protein NosD.
  
    0.815
yccM
Electron transport protein YccM.
 
  
 0.614
ccoP_2
Cytochrome c oxidase subunit III.
 
 
 0.571
LuPra_00183
Cytochrome c, mono-and diheme variants.
  
 
 0.570
ccoP2
Cytochrome c oxidase subunit III.
 
 
 0.546
gcd_2
Quinoprotein glucose dehydrogenase.
  
 
 0.545
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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