STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hilA_12Transcriptional regulator HilA. (125 aa)    
Predicted Functional Partners:
LuPra_02660
Putative O-linked N-acetylglucosamine transferase, SPINDLY family.
       0.682
hilA_2
Transcriptional regulator HilA.
  
    0.623
LuPra_01469
Invasion protein regulator.
  
     0.601
LuPra_01941
TolB_N domain-containing protein.
  
     0.597
garA_5
Glycogen accumulation regulator GarA.
  
     0.563
LuPra_00987
Invasion protein regulator.
  
     0.560
LuPra_02658
Uncharacterized protein.
       0.546
LuPra_00907
Invasion protein regulator.
  
     0.502
arcA
Dye resistance protein.
  
     0.464
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.