STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
walR_2Transcriptional regulatory protein WalR. (239 aa)    
Predicted Functional Partners:
phoR_3
Alkaline phosphatase synthesis sensor protein PhoR.
 
 0.927
rcsC_1
Sensor kinase protein RcsC.
 
 
 0.919
evgS_1
Sensor protein EvgS.
 
 0.900
LuPra_03117
Blue-light-activated protein.
 
 0.893
LuPra_00248
Blue-light-activated protein.
 
0.889
rpfC_3
Sensory/regulatory protein RpfC.
 
 0.886
rpfC_5
Histidine kinase.
 
 0.860
luxQ_7
Histidine kinase.
 
0.837
rpfC_6
Sensory/regulatory protein RpfC.
 
0.830
arcB_2
Aerobic respiration control sensor protein ArcB.
 
 
0.829
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.