STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LuPra_02944Mycothiol conjugate amidase Mca. (887 aa)    
Predicted Functional Partners:
sglT_1
Na(+)/glucose symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.764
LuPra_00443
Uncharacterized protein.
  
     0.731
LuPra_01781
Uncharacterized protein.
  
     0.722
LuPra_03874
Uncharacterized protein.
  
     0.722
LuPra_02997
Uncharacterized protein.
  
     0.619
LuPra_05637
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.589
LuPra_03073
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.588
LuPra_00056
Uncharacterized protein.
  
     0.569
LuPra_02809
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.523
yfiT_1
Metal-dependent hydrolase YfiT.
  
    0.498
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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