STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mscS_1Small-conductance mechanosensitive channel. (554 aa)    
Predicted Functional Partners:
gltC
HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family.
       0.559
mltF_2
Membrane-bound lytic murein transglycosylase F.
  
     0.494
sglT_4
Na(+)/glucose symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.479
mltF_1
Membrane-bound lytic murein transglycosylase F.
  
     0.474
mscS_2
Small-conductance mechanosensitive channel.
 
  
 0.456
LuPra_02582
Putative inner membrane protein.
  
     0.445
LuPra_02274
Outer membrane lipoprotein-sorting protein.
  
     0.426
ino1
Inositol-3-phosphate synthase.
       0.422
LuPra_02223
Uncharacterized protein.
  
     0.407
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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