Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LuPra_04310 | accA1_1 | LuPra_04310 | LuPra_04312 | Methylmalonyl-CoA carboxyltransferase 12S subunit. | Acetyl-/propionyl-coenzyme A carboxylase alpha chain. | 0.994 |
| LuPra_04310 | accC | LuPra_04310 | LuPra_04175 | Methylmalonyl-CoA carboxyltransferase 12S subunit. | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.996 |
| LuPra_04310 | birA | LuPra_04310 | LuPra_04489 | Methylmalonyl-CoA carboxyltransferase 12S subunit. | Bifunctional protein BirA. | 0.791 |
| LuPra_04310 | cfiB | LuPra_04310 | LuPra_05206 | Methylmalonyl-CoA carboxyltransferase 12S subunit. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.819 |
| LuPra_04310 | gcdC_2 | LuPra_04310 | LuPra_05469 | Methylmalonyl-CoA carboxyltransferase 12S subunit. | Glutaconyl-CoA decarboxylase subunit gamma. | 0.976 |
| accA1_1 | LuPra_04310 | LuPra_04312 | LuPra_04310 | Acetyl-/propionyl-coenzyme A carboxylase alpha chain. | Methylmalonyl-CoA carboxyltransferase 12S subunit. | 0.994 |
| accA1_1 | accB | LuPra_04312 | LuPra_04176 | Acetyl-/propionyl-coenzyme A carboxylase alpha chain. | Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.971 |
| accA1_1 | accD5 | LuPra_04312 | LuPra_05471 | Acetyl-/propionyl-coenzyme A carboxylase alpha chain. | Putative propionyl-CoA carboxylase beta chain 5. | 0.914 |
| accA1_1 | birA | LuPra_04312 | LuPra_04489 | Acetyl-/propionyl-coenzyme A carboxylase alpha chain. | Bifunctional protein BirA. | 0.802 |
| accB | accA1_1 | LuPra_04176 | LuPra_04312 | Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Acetyl-/propionyl-coenzyme A carboxylase alpha chain. | 0.971 |
| accB | accC | LuPra_04176 | LuPra_04175 | Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.999 |
| accB | birA | LuPra_04176 | LuPra_04489 | Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Bifunctional protein BirA. | 0.885 |
| accB | gcdC_2 | LuPra_04176 | LuPra_05469 | Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Glutaconyl-CoA decarboxylase subunit gamma. | 0.913 |
| accC | LuPra_04310 | LuPra_04175 | LuPra_04310 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Methylmalonyl-CoA carboxyltransferase 12S subunit. | 0.996 |
| accC | accB | LuPra_04175 | LuPra_04176 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.999 |
| accC | accD5 | LuPra_04175 | LuPra_05471 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Putative propionyl-CoA carboxylase beta chain 5. | 0.996 |
| accC | birA | LuPra_04175 | LuPra_04489 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Bifunctional protein BirA. | 0.788 |
| accC | cfiB | LuPra_04175 | LuPra_05206 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.710 |
| accD5 | accA1_1 | LuPra_05471 | LuPra_04312 | Putative propionyl-CoA carboxylase beta chain 5. | Acetyl-/propionyl-coenzyme A carboxylase alpha chain. | 0.914 |
| accD5 | accC | LuPra_05471 | LuPra_04175 | Putative propionyl-CoA carboxylase beta chain 5. | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.996 |
page 1 of 3