STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LuPra_04621Multidrug export ATP-binding/permease protein. (612 aa)    
Predicted Functional Partners:
lcfB_4
Long-chain-fatty-acid--CoA ligase.
  
 0.831
ppiA
Peptidyl-prolyl cis-trans isomerase A.
 
 
   0.814
LuPra_04620
Uncharacterized protein.
       0.592
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.558
LuPra_04624
Putative integral membrane protein.
  
    0.529
ptpA_7
Prolyl tripeptidyl peptidase.
       0.528
ctaB2
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
    
 0.527
moeZ
Putative adenylyltransferase/sulfurtransferase MoeZ.
 
 0.500
LuPra_00826
Putative bile acid beta-glucosidase.
    
  0.495
LuPra_01777
DinB superfamily protein.
  
     0.473
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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