STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lutA_2Lactate utilization protein A. (240 aa)    
Predicted Functional Partners:
lutB
Lactate utilization protein B.
 
 0.998
lutC
Lactate utilization protein C.
 
 
 0.990
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.909
LuPra_04724
Uncharacterized protein.
       0.773
LuPra_04725
Uncharacterized protein.
       0.773
frdB_2
Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 
   0.671
glcA
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.611
LuPra_02134
Putative FAD-linked oxidoreductase.
  
 0.458
afr_6
1,5-anhydro-D-fructose reductase.
  
    0.439
fadB
Fatty acid oxidation complex subunit alpha.
  
  
 0.406
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.