STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sglT_5Na(+)/glucose symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (480 aa)    
Predicted Functional Partners:
panF
Pantothenate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.723
LuPra_05049
Uncharacterized protein.
 
    0.621
fadM_1
Proline dehydrogenase 1.
  
  
 0.610
fadM_2
Proline dehydrogenase 1.
  
  
 0.610
LuPra_05344
Uncharacterized protein.
     0.577
rfaQ_2
Lipopolysaccharide core heptosyltransferase RfaQ.
       0.563
hldE_2
Bifunctional protein HldE.
       0.563
hldE_3
Bifunctional protein HldE.
       0.563
LuPra_05053
Uncharacterized protein.
       0.563
pbpE_6
Penicillin-binding protein E.
      0.560
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.