STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
melAAlpha-galactosidase. (480 aa)    
Predicted Functional Partners:
atsA_1
Arylsulfatase.
     
  0.900
atsA_4
Arylsulfatase.
     
  0.900
mro
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
     
  0.900
licC
Permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 0.666
LuPra_05373
Putative dienelactone hydrolase.
  
     0.604
rhaB
Rhamnulokinase.
  
  
 0.576
LuPra_03142
GDSL-like Lipase/Acylhydrolase.
  
     0.567
LuPra_00249
Putative dienelactone hydrolase.
  
     0.557
LuPra_00795
Alpha/beta hydrolase family protein.
  
     0.535
LuPra_02900
Hydroxypyruvate isomerase.
  
     0.535
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.