STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LuPra_06254Lipid A core-O-antigen ligase. (470 aa)    
Predicted Functional Partners:
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.883
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.883
tuaA
Undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase.
  
  
 0.865
LuPra_06270
Mycofactocin system glycosyltransferase.
 
  
 0.763
wzxC
Lipopolysaccharide biosynthesis protein WzxC.
 
  
 0.670
LuPra_06268
Chitooligosaccharide deacetylase NodB.
 
   
 0.573
kpsD_2
Polysialic acid transport protein KpsD.
 
  
 0.485
wcaJ_3
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.476
wbbL_5
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
  
  
 0.463
pgaC_4
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
 
   
 0.458
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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