STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THL1_1983Glycosyl transferase. (296 aa)    
Predicted Functional Partners:
THL1_1985
Sugar transferase.
 
 
 0.853
THL1_1984
Hypothetical protein.
 
 0.803
THL1_1986
Acetyltransferase.
  
 
 0.798
THL1_1982
Hypothetical protein.
  
 0.761
THL1_605
Hypothetical protein.
 
  
 0.748
THL1_807
Hypothetical protein.
 
  
 0.746
THL1_5265
Glycosyl transferase.
  
     0.690
THL1_804
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.651
THL1_602
Capsular exopolysaccharide family protein.
 
  
 0.633
THL1_1987
Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.612
Your Current Organism:
Pseudomonas sp. TCUHL1
NCBI taxonomy Id: 1856685
Other names: P. sp. TCU-HL1, Pseudomonas sp. TCU-HL1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.