STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001931685_00998Unannotated protein. (218 aa)    
Predicted Functional Partners:
GCA_001931685_00997
Unannotated protein.
     0.978
GCA_001931685_01000
Unannotated protein.
 
  0.973
GCA_001931685_00999
Unannotated protein.
 
  0.971
GCA_001931685_01016
Unannotated protein.
 
 
 0.969
GCA_001931685_01001
Unannotated protein.
  
 
  0.940
GCA_001931685_04023
Unannotated protein.
  
 
  0.903
GCA_001931685_03949
Unannotated protein.
  
  0.873
GCA_001931685_03950
Unannotated protein.
  
 
  0.869
GCA_001931685_04007
Unannotated protein.
  
  
 
0.867
GCA_001931685_04594
Unannotated protein.
  
  
 
0.864
Your Current Organism:
Rhizobium arenae
NCBI taxonomy Id: 1856850
Other names: KCTC 52299, MCCC 1K03215, R. arenae, Rhizobium arenae Zhang et al. 2017, Rhizobium sp. MIM27, strain MIM27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.