STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBA80821.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)    
Predicted Functional Partners:
OBA80777.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OBA80820.1
Cutinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
trmB
tRNA (guanosine(46)-N7)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.550
OBA80778.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.525
OBA80776.1
Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
OBA80779.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
OBA80780.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
   
   0.451
OBA80782.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.449
Your Current Organism:
Mycobacterium sp. 11649663
NCBI taxonomy Id: 1856861
Other names: M. sp. 1164966.3, Mycobacterium sp. 1164966.3
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