STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBA79071.1Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
OBA78625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.829
OBA79070.1
Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.800
OBA79069.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.794
OBA78320.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.777
OBA80798.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.745
OBA84577.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.710
OBA79068.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.693
OBA78550.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.693
OBA77723.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.688
OBA84281.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.688
Your Current Organism:
Mycobacterium sp. 11649663
NCBI taxonomy Id: 1856861
Other names: M. sp. 1164966.3, Mycobacterium sp. 1164966.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.