STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBI85379.1phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)    
Predicted Functional Partners:
OBI83896.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.619
OBI83895.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.617
OBI83897.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.596
OBI83898.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.572
OBI85380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.547
OBI82595.1
Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
OBI89647.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.496
OBI92149.1
Gamma-butyrobetaine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.495
OBI81017.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.488
OBI88791.1
acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.466
Your Current Organism:
Mycobacterium sp. 12458059
NCBI taxonomy Id: 1856862
Other names: M. sp. 1245805.9, Mycobacterium sp. 1245805.9
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.