STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCW95877.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)    
Predicted Functional Partners:
OCW95879.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.928
OCW95878.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.926
OCW95881.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.917
OCW95762.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.898
OCW93702.1
Patatin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.853
OCW95245.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.848
OCW94063.1
Outer membrane protein assembly factor BamA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.848
OCW93577.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.848
OCW95875.1
Cobalamin synthesis protein P47K; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.815
OCW95887.1
Squalene--hopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
Your Current Organism:
Macellibacteroides sp. HHZS
NCBI taxonomy Id: 1857568
Other names: M. sp. HH-ZS, Macellibacteroides sp. HH-ZS
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