STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCW95643.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (92 aa)    
Predicted Functional Partners:
OCW95644.1
Conjugative transposon protein TraK; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.784
OCW95642.1
Conjugative transposon protein TraM; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
OCW95645.1
Conjugative transposon protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.631
OCW95646.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.605
OCW95640.1
Conjugal transfer protein TraO; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
OCW95641.1
Conjugative transposon protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
OCW95639.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
OCW95647.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.466
OCW95637.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.419
OCW95638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.419
Your Current Organism:
Macellibacteroides sp. HHZS
NCBI taxonomy Id: 1857568
Other names: M. sp. HH-ZS, Macellibacteroides sp. HH-ZS
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