STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCW95306.1Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)    
Predicted Functional Partners:
OCW93107.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.762
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.703
OCW92383.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.624
OCW95234.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.591
OCW92542.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.581
OCW93867.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
OCW94588.1
Xanthan lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.567
OCW93861.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.537
OCW93147.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.534
OCW92659.1
LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.512
Your Current Organism:
Macellibacteroides sp. HHZS
NCBI taxonomy Id: 1857568
Other names: M. sp. HH-ZS, Macellibacteroides sp. HH-ZS
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