STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCW93062.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)    
Predicted Functional Partners:
OCW93061.1
Dipeptide epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.921
OCW93060.1
Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.847
OCW94588.1
Xanthan lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.801
OCW95850.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.726
OCW95649.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.726
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
 
  0.715
OCW93549.1
UDP-N-acetylmuramate--alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.715
OCW95993.1
Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.611
OCW95114.1
DUF4837 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.611
OCW93824.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.611
Your Current Organism:
Macellibacteroides sp. HHZS
NCBI taxonomy Id: 1857568
Other names: M. sp. HH-ZS, Macellibacteroides sp. HH-ZS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.