STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG18076.1Hypothetical protein. (245 aa)    
Predicted Functional Partners:
SFG52623.1
Hypothetical protein.
  
     0.669
SFG18104.1
Hypothetical protein.
       0.646
SFG62454.1
Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains.
  
     0.517
SFG45307.1
Hypothetical protein.
  
     0.455
SFG45335.1
Hypothetical protein.
  
     0.447
SFG40150.1
Hypothetical protein.
  
     0.433
SFG50499.1
Hypothetical protein.
  
     0.433
SFG15061.1
Hypothetical protein.
  
     0.431
SFG29722.1
TLP18.3, Psb32 and MOLO-1 founding protein of phosphatase.
  
 
   0.402
Your Current Organism:
Corynebacterium spheniscorum
NCBI taxonomy Id: 185761
Other names: C. spheniscorum, CCUG 45512, CECT 5986, Corynebacterium spheniscorum Goyache et al. 2003, DSM 44757, JCM 12271, strain PG 39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.