Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG44235.1 | SFG44262.1 | SAMN05660282_00905 | SAMN05660282_00906 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Hypothetical protein. | 0.872 |
SFG44235.1 | SFG44284.1 | SAMN05660282_00905 | SAMN05660282_00907 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Energy-coupling factor transport system permease protein. | 0.811 |
SFG44235.1 | SFG44309.1 | SAMN05660282_00905 | SAMN05660282_00908 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Energy-coupling factor transport system ATP-binding protein. | 0.772 |
SFG44235.1 | SFG44336.1 | SAMN05660282_00905 | SAMN05660282_00909 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Energy-coupling factor transport system substrate-specific component. | 0.725 |
SFG44262.1 | SFG44235.1 | SAMN05660282_00906 | SAMN05660282_00905 | Hypothetical protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.872 |
SFG44262.1 | SFG44284.1 | SAMN05660282_00906 | SAMN05660282_00907 | Hypothetical protein. | Energy-coupling factor transport system permease protein. | 0.985 |
SFG44262.1 | SFG44309.1 | SAMN05660282_00906 | SAMN05660282_00908 | Hypothetical protein. | Energy-coupling factor transport system ATP-binding protein. | 0.854 |
SFG44262.1 | SFG44336.1 | SAMN05660282_00906 | SAMN05660282_00909 | Hypothetical protein. | Energy-coupling factor transport system substrate-specific component. | 0.859 |
SFG44262.1 | gmk | SAMN05660282_00906 | SAMN05660282_01543 | Hypothetical protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.781 |
SFG44262.1 | rplB | SAMN05660282_00906 | SAMN05660282_00083 | Hypothetical protein. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.733 |
SFG44262.1 | rplN | SAMN05660282_00906 | SAMN05660282_00099 | Hypothetical protein. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.743 |
SFG44262.1 | rpsG | SAMN05660282_00906 | SAMN05660282_00061 | Hypothetical protein. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.745 |
SFG44262.1 | rpsK | SAMN05660282_00906 | SAMN05660282_00120 | Hypothetical protein. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.738 |
SFG44262.1 | rpsS | SAMN05660282_00906 | SAMN05660282_00084 | Hypothetical protein. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.733 |
SFG44284.1 | SFG44235.1 | SAMN05660282_00907 | SAMN05660282_00905 | Energy-coupling factor transport system permease protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.811 |
SFG44284.1 | SFG44262.1 | SAMN05660282_00907 | SAMN05660282_00906 | Energy-coupling factor transport system permease protein. | Hypothetical protein. | 0.985 |
SFG44284.1 | SFG44309.1 | SAMN05660282_00907 | SAMN05660282_00908 | Energy-coupling factor transport system permease protein. | Energy-coupling factor transport system ATP-binding protein. | 0.999 |
SFG44284.1 | SFG44336.1 | SAMN05660282_00907 | SAMN05660282_00909 | Energy-coupling factor transport system permease protein. | Energy-coupling factor transport system substrate-specific component. | 0.960 |
SFG44309.1 | SFG44235.1 | SAMN05660282_00908 | SAMN05660282_00905 | Energy-coupling factor transport system ATP-binding protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.772 |
SFG44309.1 | SFG44262.1 | SAMN05660282_00908 | SAMN05660282_00906 | Energy-coupling factor transport system ATP-binding protein. | Hypothetical protein. | 0.854 |
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