STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG51271.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (250 aa)    
Predicted Functional Partners:
SFG25858.1
Fatty acid synthase, bacterial type.
  
 0.999
SFG79730.1
Polyketide synthase 13.
  
 0.942
SFG20030.1
Ferredoxin-NADP reductase.
   
 0.836
SFG77576.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.836
SFG49617.1
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1).
     
 0.735
SFG77703.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
 0.721
SFG59570.1
Catechol 2,3-dioxygenase.
  
 
 0.704
SFG55629.1
D-lactate dehydrogenase.
  
 0.683
SFG28201.1
Hypothetical protein.
    
 0.669
SFG42795.1
DNA repair exonuclease SbcCD nuclease subunit.
    
   0.669
Your Current Organism:
Corynebacterium spheniscorum
NCBI taxonomy Id: 185761
Other names: C. spheniscorum, CCUG 45512, CECT 5986, Corynebacterium spheniscorum Goyache et al. 2003, DSM 44757, JCM 12271, strain PG 39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.