STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG55378.1Hemolysin, contains CBS domains. (462 aa)    
Predicted Functional Partners:
SFG55355.1
Hemolysin, contains CBS domains.
 
   
0.945
SFG55399.1
Superfamily II DNA and RNA helicase.
       0.780
SFG55332.1
Hypothetical protein.
       0.720
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.679
SFG55446.1
ABC-type multidrug transport system, ATPase and permease component.
   
   0.497
SFG55425.1
ATP-binding cassette, subfamily B, IrtA.
       0.491
SFG55473.1
ATP-binding cassette, subfamily B, IrtB.
       0.491
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
    0.451
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
 
    0.439
SFG29362.1
Phosphate starvation-inducible protein PhoH.
  
    0.401
Your Current Organism:
Corynebacterium spheniscorum
NCBI taxonomy Id: 185761
Other names: C. spheniscorum, CCUG 45512, CECT 5986, Corynebacterium spheniscorum Goyache et al. 2003, DSM 44757, JCM 12271, strain PG 39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.