STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG59990.1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
SFG59970.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.767
SFG59941.1
A/G-specific DNA-adenine glycosylase.
       0.644
SFG85521.1
Hypothetical protein.
  
     0.587
SFG19631.1
Protein of unknown function.
   
    0.569
lpqB
Lipoprotein LpqB beta-propeller domain-containing protein.
  
     0.568
SFG25700.1
Integral membrane protein.
  
     0.567
SFG39405.1
Protein of unknown function.
  
     0.532
SFG51617.1
S-formylglutathione hydrolase FrmB.
  
     0.509
SFG79811.1
Hypothetical protein.
  
     0.497
SFG20005.1
Hypothetical protein.
  
     0.483
Your Current Organism:
Corynebacterium spheniscorum
NCBI taxonomy Id: 185761
Other names: C. spheniscorum, CCUG 45512, CECT 5986, Corynebacterium spheniscorum Goyache et al. 2003, DSM 44757, JCM 12271, strain PG 39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.