STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG61251.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
SFG61222.1
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
    0.815
SFG61273.1
Trehalose 6-phosphate synthase.
  
    0.763
SFG30301.1
Hypothetical protein.
    
   0.630
SFG61300.1
Hypothetical protein.
       0.606
SFG61324.1
Uncharacterized membrane protein YjjP, DUF1212 family.
       0.552
SFG70936.1
Succinate dehydrogenase subunit A.
    
   0.476
SFG72998.1
Two-component system, OmpR family, sensor kinase.
    
  0.412
Your Current Organism:
Corynebacterium spheniscorum
NCBI taxonomy Id: 185761
Other names: C. spheniscorum, CCUG 45512, CECT 5986, Corynebacterium spheniscorum Goyache et al. 2003, DSM 44757, JCM 12271, strain PG 39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.