STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG66879.1ABC-2 type transport system permease protein. (229 aa)    
Predicted Functional Partners:
SFG66861.1
Cytochrome c oxidase assembly protein subunit 15.
 
   
 0.936
SFG66931.1
Alpha-1,6-mannosyltransferase.
 
   
 0.867
SFG66908.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.823
SFG66840.1
NADPH:quinone reductase.
       0.707
SFG66953.1
Predicted transcriptional regulator, ArsR family.
 
     0.646
SFG80688.1
Protein of unknown function.
  
     0.575
SFG66973.1
Iron-regulated ABC transporter membrane component SufB.
       0.548
SFG66996.1
Iron-regulated ABC transporter permease protein SufD.
       0.548
SFG67017.1
Iron-regulated ABC transporter ATPase subunit SufC.
       0.517
SFG67037.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.517
Your Current Organism:
Corynebacterium spheniscorum
NCBI taxonomy Id: 185761
Other names: C. spheniscorum, CCUG 45512, CECT 5986, Corynebacterium spheniscorum Goyache et al. 2003, DSM 44757, JCM 12271, strain PG 39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.