Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ONK10803.1 | ONK12578.1 | STBA_15260 | STBA_33260 | Signal transduction histidine-protein kinase BarA. | Hypothetical protein. | 0.919 |
| ONK10803.1 | ONK12732.1 | STBA_15260 | STBA_34840 | Signal transduction histidine-protein kinase BarA. | Prephenate dehydratase. | 0.451 |
| ONK10803.1 | ONK13693.1 | STBA_15260 | STBA_44640 | Signal transduction histidine-protein kinase BarA. | RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.919 |
| ONK10803.1 | ONK14206.1 | STBA_15260 | STBA_49860 | Signal transduction histidine-protein kinase BarA. | Transcriptional activator NphR; smCOG: SMCOG1015:AraC_family_transcriptional_regulator (Score: 50.8; E-value: 3.4e-15). | 0.676 |
| ONK10803.1 | ONK14534.1 | STBA_15260 | STBA_53190 | Signal transduction histidine-protein kinase BarA. | RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.919 |
| ONK10803.1 | ONK15104.1 | STBA_15260 | STBA_59180 | Signal transduction histidine-protein kinase BarA. | Glutamate synthase (NADPH) large chain. | 0.957 |
| ONK10803.1 | ONK15842.1 | STBA_15260 | STBA_66830 | Signal transduction histidine-protein kinase BarA. | Regulatory protein SoxS. | 0.804 |
| ONK10803.1 | rpoA | STBA_15260 | STBA_27810 | Signal transduction histidine-protein kinase BarA. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.421 |
| ONK10803.1 | sigA | STBA_15260 | STBA_14740 | Signal transduction histidine-protein kinase BarA. | RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.919 |
| ONK12578.1 | ONK10803.1 | STBA_33260 | STBA_15260 | Hypothetical protein. | Signal transduction histidine-protein kinase BarA. | 0.919 |
| ONK12578.1 | ONK15842.1 | STBA_33260 | STBA_66830 | Hypothetical protein. | Regulatory protein SoxS. | 0.667 |
| ONK12578.1 | rpoA | STBA_33260 | STBA_27810 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.912 |
| ONK12732.1 | ONK10803.1 | STBA_34840 | STBA_15260 | Prephenate dehydratase. | Signal transduction histidine-protein kinase BarA. | 0.451 |
| ONK12732.1 | ONK15104.1 | STBA_34840 | STBA_59180 | Prephenate dehydratase. | Glutamate synthase (NADPH) large chain. | 0.481 |
| ONK12732.1 | ONK15842.1 | STBA_34840 | STBA_66830 | Prephenate dehydratase. | Regulatory protein SoxS. | 0.620 |
| ONK13693.1 | ONK10803.1 | STBA_44640 | STBA_15260 | RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine-protein kinase BarA. | 0.919 |
| ONK13693.1 | ONK15842.1 | STBA_44640 | STBA_66830 | RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Regulatory protein SoxS. | 0.667 |
| ONK13693.1 | rpoA | STBA_44640 | STBA_27810 | RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
| ONK14206.1 | ONK10803.1 | STBA_49860 | STBA_15260 | Transcriptional activator NphR; smCOG: SMCOG1015:AraC_family_transcriptional_regulator (Score: 50.8; E-value: 3.4e-15). | Signal transduction histidine-protein kinase BarA. | 0.676 |
| ONK14206.1 | ONK15104.1 | STBA_49860 | STBA_59180 | Transcriptional activator NphR; smCOG: SMCOG1015:AraC_family_transcriptional_regulator (Score: 50.8; E-value: 3.4e-15). | Glutamate synthase (NADPH) large chain. | 0.641 |
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