STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5FS29_DACPDGalacturan 1-4-alpha-galacturonidase A; Belongs to the glycosyl hydrolase 28 family. (433 aa)    
Predicted Functional Partners:
M5GGX0_DACPD
Uncharacterized protein.
    
   0.989
M5GGU6_DACPD
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
   
   0.654
M5G5X9_DACPD
Glycoside hydrolase.
     
 0.652
M5GGX2_DACPD
Developmentally regulated GTP binding protein 1.
    
   0.636
M5FRS9_DACPD
Glycoside hydrolase family 51 protein.
     
 0.614
M5FVE7_DACPD
Isocitrate lyase.
   
  
 0.557
M5G7K4_DACPD
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.542
M5GEI6_DACPD
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.542
M5GG61_DACPD
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.542
M5FNA7_DACPD
Pectin lyase-like protein; Belongs to the glycosyl hydrolase 28 family.
  
  
  0.537
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.