STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5FT00_DACPDVitamin B6 biosynthesis protein; Belongs to the PdxS/SNZ family. (291 aa)    
Predicted Functional Partners:
M5G934_DACPD
SNO glutamine amidotransferase.
 0.998
M5FSI0_DACPD
Pyridoxamine 5'-phosphate oxidase.
    
 0.908
M5G1E5_DACPD
Uncharacterized protein.
     
 0.850
M5GCF7_DACPD
Bud site selection protein 16.
   
 0.828
M5FRV9_DACPD
PHP domain-like protein.
    
 0.823
M5FYS6_DACPD
POP1-domain-containing protein.
     
 0.809
M5GDS1_DACPD
POP4 domain-containing protein.
     
 0.809
M5FY46_DACPD
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
    
 0.798
M5G473_DACPD
Aldolase.
    
 0.798
M5G0C5_DACPD
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
     
 0.789
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.