M5FT39_DACPD protein (Dacryopinax primogenitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M5FT39_DACPD

Uncharacterized protein. (73 aa)

Predicted Functional Partners:

M5G548_DACPD

0.658

M5GB75_DACPD

0.613

M5FW21_DACPD

0.607

M5G022_DACPD

0.561

M5GC17_DACPD

0.558

M5FN65_DACPD

0.521

M5FNH1_DACPD

0.521

M5FPY9_DACPD

0.521

M5FPZ7_DACPD

0.521

M5FR90_DACPD

0.521

Your Current Organism:

Dacryopinax primogenitus

NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M5FN65_DACPD	M5FT39_DACPD	M5FN65	M5FT39	Acetyl-CoA synthetase-like protein.	Uncharacterized protein.	0.521
M5FN65_DACPD	M5FW21_DACPD	M5FN65	M5FW21	Acetyl-CoA synthetase-like protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.858
M5FNH1_DACPD	M5FT39_DACPD	M5FNH1	M5FT39	Acetyl-CoA synthetase-like protein.	Uncharacterized protein.	0.521
M5FNH1_DACPD	M5FW21_DACPD	M5FNH1	M5FW21	Acetyl-CoA synthetase-like protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.858
M5FPY9_DACPD	M5FT39_DACPD	M5FPY9	M5FT39	Acetyl-CoA synthetase-like protein.	Uncharacterized protein.	0.521
M5FPY9_DACPD	M5FW21_DACPD	M5FPY9	M5FW21	Acetyl-CoA synthetase-like protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.858
M5FPZ7_DACPD	M5FT39_DACPD	M5FPZ7	M5FT39	Uncharacterized protein.	Uncharacterized protein.	0.521
M5FPZ7_DACPD	M5FW21_DACPD	M5FPZ7	M5FW21	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.858
M5FR90_DACPD	M5FT39_DACPD	M5FR90	M5FT39	Phenylacetyl-CoA ligase.	Uncharacterized protein.	0.521
M5FR90_DACPD	M5FW21_DACPD	M5FR90	M5FW21	Phenylacetyl-CoA ligase.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.858
M5FT39_DACPD	M5FN65_DACPD	M5FT39	M5FN65	Uncharacterized protein.	Acetyl-CoA synthetase-like protein.	0.521
M5FT39_DACPD	M5FNH1_DACPD	M5FT39	M5FNH1	Uncharacterized protein.	Acetyl-CoA synthetase-like protein.	0.521
M5FT39_DACPD	M5FPY9_DACPD	M5FT39	M5FPY9	Uncharacterized protein.	Acetyl-CoA synthetase-like protein.	0.521
M5FT39_DACPD	M5FPZ7_DACPD	M5FT39	M5FPZ7	Uncharacterized protein.	Uncharacterized protein.	0.521
M5FT39_DACPD	M5FR90_DACPD	M5FT39	M5FR90	Uncharacterized protein.	Phenylacetyl-CoA ligase.	0.521
M5FT39_DACPD	M5FW21_DACPD	M5FT39	M5FW21	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.607
M5FT39_DACPD	M5G022_DACPD	M5FT39	M5G022	Uncharacterized protein.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.561
M5FT39_DACPD	M5G548_DACPD	M5FT39	M5G548	Uncharacterized protein.	Ribonuclease H-like protein.	0.658
M5FT39_DACPD	M5GB75_DACPD	M5FT39	M5GB75	Uncharacterized protein.	Tryptophan synthase.	0.613
M5FT39_DACPD	M5GC17_DACPD	M5FT39	M5GC17	Uncharacterized protein.	Carbon-nitrogen hydrolase.	0.558

page 1 of 2

Server load: low (26%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About