STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5FTI2_DACPDCOPI associated. (149 aa)    
Predicted Functional Partners:
M5GB75_DACPD
Tryptophan synthase.
    
  0.803
M5FW78_DACPD
Nucleotide-binding domain-containing protein.
  
 0.687
M5G2A6_DACPD
Uncharacterized protein.
  
 0.687
M5G8I7_DACPD
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.687
M5GH35_DACPD
DAO-domain-containing protein.
  
 0.687
M5FXC0_DACPD
PLP-dependent transferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.684
M5G0B9_DACPD
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.673
M5FVM8_DACPD
TPR-like protein.
    
 0.672
M5G6Q6_DACPD
TPR-like protein.
    
 0.672
M5GC00_DACPD
PLP-dependent transferase.
  
 
 0.662
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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