STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5FVE7_DACPDIsocitrate lyase. (541 aa)    
Predicted Functional Partners:
M5FQS9_DACPD
Malate synthase; Belongs to the malate synthase family.
 
 
 0.998
M5FTU2_DACPD
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.913
M5GC00_DACPD
PLP-dependent transferase.
  
 
 0.913
M5FXS0_DACPD
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.912
M5G7K4_DACPD
Citrate synthase; Belongs to the citrate synthase family.
  
 0.897
M5GEI6_DACPD
Citrate synthase; Belongs to the citrate synthase family.
  
 0.897
M5GG61_DACPD
Citrate synthase; Belongs to the citrate synthase family.
  
 0.897
M5FRN4_DACPD
Zn(2)-C6 fungal-type domain-containing protein.
  
 0.880
M5G6U0_DACPD
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.847
M5G7G3_DACPD
Peroxisomal hydratase-dehydrogenase-epimerase.
  
 
 0.836
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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