STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5FVL5_DACPDChondroitin AC/alginate lyase. (624 aa)    
Predicted Functional Partners:
M5GA54_DACPD
Rbsn domain-containing protein.
   
 0.933
M5FUW7_DACPD
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.925
M5G9F1_DACPD
Phosphatidylinositol 3-kinase VPS34.
    
 0.907
M5GF26_DACPD
Uncharacterized protein.
    
 0.884
M5G5P2_DACPD
VPS9 domain-containing protein.
    
 0.882
M5GGS1_DACPD
FAD/NADP-binding domain-containing protein.
    
 0.874
M5FSD3_DACPD
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.819
M5GCS0_DACPD
Pep3_Vps18 domain-containing protein.
    
 
 0.789
M5FPE1_DACPD
Rab-protein geranylgeranyltransferase.
    
 0.779
M5G5T2_DACPD
Uncharacterized protein.
   
 0.774
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.