STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5FYU5_DACPDER to Golgi transport-related protein. (455 aa)    
Predicted Functional Partners:
M5G8E5_DACPD
DUF1692-domain-containing protein.
  
 
0.989
M5GFQ6_DACPD
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 0.959
M5FSD3_DACPD
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
 
      0.900
M5G389_DACPD
Microsomal signal peptidase subunit SPC12.
    
   0.644
M5G5X6_DACPD
ERO1-domain-containing protein.
    
   0.643
M5FUJ5_DACPD
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
 
 0.551
M5FV81_DACPD
Uncharacterized protein.
  
  
 0.547
M5FV10_DACPD
tRNA-guanine transglycosylase.
   
 
 0.467
M5G6R7_DACPD
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
   0.466
M5FQ59_DACPD
FAD dependent oxidoreductase.
     
 0.459
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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