STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5G1D1_DACPDUncharacterized protein. (572 aa)    
Predicted Functional Partners:
M5GFR0_DACPD
Small nuclear ribonucleoprotein Sm D3.
    
 0.829
M5G8I2_DACPD
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.826
M5G1S7_DACPD
Small nuclear ribo protein F.
    
  0.821
M5G2T3_DACPD
Small nuclear ribonucleoprotein Sm D2.
    
 0.815
M5GCI3_DACPD
Uncharacterized protein.
    
 0.813
M5G536_DACPD
Uncharacterized protein.
    
 0.800
M5GCJ3_DACPD
ANK_REP_REGION domain-containing protein.
    
 0.784
M5FNB5_DACPD
EF1G-domain-containing protein.
    
  0.762
M5FNI2_DACPD
RNA-binding domain-containing protein.
    
 0.755
M5FWT6_DACPD
RNA-binding domain-containing protein.
    
 0.755
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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