M5G2I2_DACPD protein (Dacryopinax primogenitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M5G2I2_DACPD

Uncharacterized protein. (257 aa)

Predicted Functional Partners:

M5FU96_DACPD

0.460

M5FP12_DACPD

0.418

M5FPM6_DACPD

0.418

M5FUC6_DACPD

0.418

M5G058_DACPD

0.418

M5G1Y2_DACPD

0.418

M5G496_DACPD

0.418

M5GCZ7_DACPD

0.418

M5GDU8_DACPD

0.418

M5GDV3_DACPD

0.418

Your Current Organism:

Dacryopinax primogenitus

NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M5FP12_DACPD	M5G2I2_DACPD	M5FP12	M5G2I2	Uncharacterized protein.	Uncharacterized protein.	0.418
M5FPM6_DACPD	M5G2I2_DACPD	M5FPM6	M5G2I2	Uncharacterized protein.	Uncharacterized protein.	0.418
M5FU96_DACPD	M5G2I2_DACPD	M5FU96	M5G2I2	Prohibitin.	Uncharacterized protein.	0.460
M5FUC6_DACPD	M5G2I2_DACPD	M5FUC6	M5G2I2	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.418
M5G058_DACPD	M5G2I2_DACPD	M5G058	M5G2I2	Uncharacterized protein.	Uncharacterized protein.	0.418
M5G1Y2_DACPD	M5G2I2_DACPD	M5G1Y2	M5G2I2	Uncharacterized protein.	Uncharacterized protein.	0.418
M5G2I2_DACPD	M5FP12_DACPD	M5G2I2	M5FP12	Uncharacterized protein.	Uncharacterized protein.	0.418
M5G2I2_DACPD	M5FPM6_DACPD	M5G2I2	M5FPM6	Uncharacterized protein.	Uncharacterized protein.	0.418
M5G2I2_DACPD	M5FU96_DACPD	M5G2I2	M5FU96	Uncharacterized protein.	Prohibitin.	0.460
M5G2I2_DACPD	M5FUC6_DACPD	M5G2I2	M5FUC6	Uncharacterized protein.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.418
M5G2I2_DACPD	M5G058_DACPD	M5G2I2	M5G058	Uncharacterized protein.	Uncharacterized protein.	0.418
M5G2I2_DACPD	M5G1Y2_DACPD	M5G2I2	M5G1Y2	Uncharacterized protein.	Uncharacterized protein.	0.418
M5G2I2_DACPD	M5G496_DACPD	M5G2I2	M5G496	Uncharacterized protein.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.418
M5G2I2_DACPD	M5GCZ7_DACPD	M5G2I2	M5GCZ7	Uncharacterized protein.	Uncharacterized protein.	0.418
M5G2I2_DACPD	M5GDU8_DACPD	M5G2I2	M5GDU8	Uncharacterized protein.	Uncharacterized protein.	0.418
M5G2I2_DACPD	M5GDV3_DACPD	M5G2I2	M5GDV3	Uncharacterized protein.	Uncharacterized protein.	0.418
M5G496_DACPD	M5G2I2_DACPD	M5G496	M5G2I2	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.418
M5GCZ7_DACPD	M5G2I2_DACPD	M5GCZ7	M5G2I2	Uncharacterized protein.	Uncharacterized protein.	0.418
M5GDU8_DACPD	M5G2I2_DACPD	M5GDU8	M5G2I2	Uncharacterized protein.	Uncharacterized protein.	0.418
M5GDV3_DACPD	M5G2I2_DACPD	M5GDV3	M5G2I2	Uncharacterized protein.	Uncharacterized protein.	0.418

Server load: low (10%) [HD]

Permalink

Network

Cooccurrence

Experiments

Neighborhood

Textmining

Fusion

Databases

Coexpression

© STRING Consortium 2024

Credits

Access

Info

About