STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5G315_DACPDBrix-domain-containing protein. (321 aa)    
Predicted Functional Partners:
M5G5K5_DACPD
Uncharacterized protein.
   
 
 0.987
M5G553_DACPD
Ribosomal protein L1.
   
   0.985
M5G4D6_DACPD
Uncharacterized protein.
   
   0.983
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.981
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.981
M5G1E1_DACPD
DEAD-domain-containing protein.
   
   0.978
M5G555_DACPD
Brix-domain-containing protein.
   
 
 0.977
M5GBH6_DACPD
Uncharacterized protein.
   
 
 0.975
M5G9K7_DACPD
Nop52-domain-containing protein.
   
 
 0.974
M5G6Y8_DACPD
P-loop containing nucleoside triphosphate hydrolase protein.
   
   0.971
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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