Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| M5FQ84_DACPD | M5FRW4_DACPD | M5FQ84 | M5FRW4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SPT16-domain-containing protein. | 0.984 |
| M5FQ84_DACPD | M5FSN8_DACPD | M5FQ84 | M5FSN8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor. | 0.992 |
| M5FQ84_DACPD | M5FUN5_DACPD | M5FQ84 | M5FUN5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| M5FQ84_DACPD | M5FVR2_DACPD | M5FQ84 | M5FVR2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | HMG-box. | 0.640 |
| M5FQ84_DACPD | M5G1Y3_DACPD | M5FQ84 | M5G1Y3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.968 |
| M5FQ84_DACPD | M5G3I1_DACPD | M5FQ84 | M5G3I1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TFIIS N-terminal domain-containing protein. | 0.860 |
| M5FQ84_DACPD | M5G6J6_DACPD | M5FQ84 | M5G6J6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RBP11-like subunit of RNA polymerase. | 0.996 |
| M5FQ84_DACPD | M5GA49_DACPD | M5FQ84 | M5GA49 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | S1 motif domain-containing protein. | 0.979 |
| M5FQ84_DACPD | M5GB67_DACPD | M5FQ84 | M5GB67 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.996 |
| M5FQ84_DACPD | M5GC21_DACPD | M5FQ84 | M5GC21 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.996 |
| M5FRW4_DACPD | M5FQ84_DACPD | M5FRW4 | M5FQ84 | SPT16-domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.984 |
| M5FRW4_DACPD | M5FSN8_DACPD | M5FRW4 | M5FSN8 | SPT16-domain-containing protein. | Transcription elongation factor. | 0.930 |
| M5FRW4_DACPD | M5FUN5_DACPD | M5FRW4 | M5FUN5 | SPT16-domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.981 |
| M5FRW4_DACPD | M5FVR2_DACPD | M5FRW4 | M5FVR2 | SPT16-domain-containing protein. | HMG-box. | 0.977 |
| M5FRW4_DACPD | M5G1Y3_DACPD | M5FRW4 | M5G1Y3 | SPT16-domain-containing protein. | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.999 |
| M5FRW4_DACPD | M5G3I1_DACPD | M5FRW4 | M5G3I1 | SPT16-domain-containing protein. | TFIIS N-terminal domain-containing protein. | 0.934 |
| M5FRW4_DACPD | M5G6J6_DACPD | M5FRW4 | M5G6J6 | SPT16-domain-containing protein. | RBP11-like subunit of RNA polymerase. | 0.984 |
| M5FRW4_DACPD | M5GA49_DACPD | M5FRW4 | M5GA49 | SPT16-domain-containing protein. | S1 motif domain-containing protein. | 0.986 |
| M5FRW4_DACPD | M5GB67_DACPD | M5FRW4 | M5GB67 | SPT16-domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.968 |
| M5FRW4_DACPD | M5GC21_DACPD | M5FRW4 | M5GC21 | SPT16-domain-containing protein. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.990 |
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