STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5G5C9_DACPDShwachman-Bodian-diamond syndrome protein. (241 aa)    
Predicted Functional Partners:
M5FYV3_DACPD
Translation elongation factor 2.
  
 
 0.974
M5GFD9_DACPD
Uncharacterized protein.
   
 
 0.935
M5FXG1_DACPD
Uncharacterized protein.
  
   0.908
M5GF36_DACPD
Ribosomal protein L37ae.
  
   0.908
M5G6N0_DACPD
C2H2-type domain-containing protein.
   
 
 0.858
M5FTX6_DACPD
Uncharacterized protein.
  
 
 0.852
M5G3X7_DACPD
40S ribosomal protein S19.
   
 
 0.836
M5GF62_DACPD
60S ribosomal protein L6.
   
 
 0.829
M5GC33_DACPD
60S ribosomal protein L5.
   
 
 0.828
M5GBB4_DACPD
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.824
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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