STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5G8S0_DACPDAAA-domain-containing protein. (828 aa)    
Predicted Functional Partners:
M5FNP7_DACPD
Vesicular-fusion protein SEC17.
   
 0.993
M5FYB5_DACPD
t-SNARE; Belongs to the syntaxin family.
   
 0.976
M5FTI7_DACPD
Snare-like protein; Belongs to the synaptobrevin family.
    
 0.968
M5G1A4_DACPD
Synaptobrevin.
   
 0.957
M5GEF5_DACPD
t-SNARE.
    
 0.955
M5GGF4_DACPD
t-SNARE.
    
 0.955
M5G7G2_DACPD
Snare-like protein; Belongs to the synaptobrevin family.
    
 0.954
M5G3Y0_DACPD
Uncharacterized protein.
   
 0.933
M5G5T6_DACPD
SLY1 protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.933
M5GCM9_DACPD
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.911
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.