M5G9A6_DACPD protein (Dacryopinax primogenitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M5G9A6_DACPD

Uncharacterized protein. (174 aa)

Predicted Functional Partners:

M5G0J3_DACPD

0.739

M5FSF8_DACPD

0.609

M5FNZ4_DACPD

0.470

M5FTJ0_DACPD

0.469

M5FNF3_DACPD

0.439

M5FRZ9_DACPD

0.439

M5FSF0_DACPD

0.439

M5FV62_DACPD

0.439

M5FZX8_DACPD

0.439

M5G0P9_DACPD

0.439

Your Current Organism:

Dacryopinax primogenitus

NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M5FNF3_DACPD	M5FSF0_DACPD	M5FNF3	M5FSF0	GATA-type domain-containing protein.	GATA-type domain-containing protein.	0.579
M5FNF3_DACPD	M5FSF8_DACPD	M5FNF3	M5FSF8	GATA-type domain-containing protein.	SRF-TF-domain-containing protein.	0.897
M5FNF3_DACPD	M5G0J3_DACPD	M5FNF3	M5G0J3	GATA-type domain-containing protein.	BHLH domain-containing protein.	0.668
M5FNF3_DACPD	M5G9A6_DACPD	M5FNF3	M5G9A6	GATA-type domain-containing protein.	Uncharacterized protein.	0.439
M5FNZ4_DACPD	M5G9A6_DACPD	M5FNZ4	M5G9A6	EF-hand domain-containing protein.	Uncharacterized protein.	0.470
M5FRZ9_DACPD	M5FSF8_DACPD	M5FRZ9	M5FSF8	GATA-type domain-containing protein.	SRF-TF-domain-containing protein.	0.612
M5FRZ9_DACPD	M5G0J3_DACPD	M5FRZ9	M5G0J3	GATA-type domain-containing protein.	BHLH domain-containing protein.	0.668
M5FRZ9_DACPD	M5G9A6_DACPD	M5FRZ9	M5G9A6	GATA-type domain-containing protein.	Uncharacterized protein.	0.439
M5FSF0_DACPD	M5FNF3_DACPD	M5FSF0	M5FNF3	GATA-type domain-containing protein.	GATA-type domain-containing protein.	0.579
M5FSF0_DACPD	M5FSF8_DACPD	M5FSF0	M5FSF8	GATA-type domain-containing protein.	SRF-TF-domain-containing protein.	0.618
M5FSF0_DACPD	M5G0J3_DACPD	M5FSF0	M5G0J3	GATA-type domain-containing protein.	BHLH domain-containing protein.	0.668
M5FSF0_DACPD	M5G9A6_DACPD	M5FSF0	M5G9A6	GATA-type domain-containing protein.	Uncharacterized protein.	0.439
M5FSF8_DACPD	M5FNF3_DACPD	M5FSF8	M5FNF3	SRF-TF-domain-containing protein.	GATA-type domain-containing protein.	0.897
M5FSF8_DACPD	M5FRZ9_DACPD	M5FSF8	M5FRZ9	SRF-TF-domain-containing protein.	GATA-type domain-containing protein.	0.612
M5FSF8_DACPD	M5FSF0_DACPD	M5FSF8	M5FSF0	SRF-TF-domain-containing protein.	GATA-type domain-containing protein.	0.618
M5FSF8_DACPD	M5FTJ0_DACPD	M5FSF8	M5FTJ0	SRF-TF-domain-containing protein.	SNF5-domain-containing protein.	0.666
M5FSF8_DACPD	M5FV62_DACPD	M5FSF8	M5FV62	SRF-TF-domain-containing protein.	GATA-type domain-containing protein.	0.612
M5FSF8_DACPD	M5FZX8_DACPD	M5FSF8	M5FZX8	SRF-TF-domain-containing protein.	GATA-type domain-containing protein.	0.612
M5FSF8_DACPD	M5G0P9_DACPD	M5FSF8	M5G0P9	SRF-TF-domain-containing protein.	Opi1-domain-containing protein.	0.612
M5FSF8_DACPD	M5G9A6_DACPD	M5FSF8	M5G9A6	SRF-TF-domain-containing protein.	Uncharacterized protein.	0.609

page 1 of 3

Server load: low (18%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About