STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5GA72_DACPDSRP40_C domain-containing protein. (53 aa)    
Predicted Functional Partners:
M5G568_DACPD
Nop domain-containing protein.
   
 
 0.982
M5GBT5_DACPD
Nop domain-containing protein.
   
 
 0.979
M5G0H2_DACPD
Centromere/microtubule binding protein cbf5.
   
 
 0.964
M5FT10_DACPD
Fibrillarin.
   
 
 0.962
M5G553_DACPD
Ribosomal protein L1.
   
   0.885
M5GH01_DACPD
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.877
M5GB02_DACPD
Pseudouridine synthase.
   
 
 0.871
M5FR29_DACPD
CBF-domain-containing protein.
   
   0.870
M5G9S3_DACPD
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.863
M5GEE8_DACPD
NOL1/NOP2/sun family RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
   0.859
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.