STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5GC76_DACPDHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (444 aa)    
Predicted Functional Partners:
M5GA59_DACPD
Chromatin assembly factor 1 subunit C.
   
 0.959
M5FP61_DACPD
MRG-domain-containing protein.
    
 0.953
M5G9D9_DACPD
Uncharacterized protein.
    
 0.933
M5GAS6_DACPD
Uncharacterized protein.
   
 0.933
M5FXT6_DACPD
Uncharacterized protein.
   
 0.928
M5G3N5_DACPD
FAS1 domain-containing protein.
   
 0.928
M5GDP4_DACPD
HDAC_interact domain-containing protein.
   
 0.928
M5G2L3_DACPD
SANT domain-containing protein.
    
 0.890
M5FQ33_DACPD
Uncharacterized protein.
    
 0.884
M5GFB1_DACPD
Thioredoxin-like_fold domain-containing protein.
   
 0.884
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.